Mika Häkkinen won the Japanese Grand Prix 1999 at Suzuka Circuit on 31 October 1999, starting from P2 on the grid. Michael Schumacher finished second for Ferrari, with Eddie Irvine completing the podium for Ferrari.
| Pos | Grid | Driver | Team | Laps | Time / Status | Pts | FL |
|---|---|---|---|---|---|---|---|
| 1 | 2 | Mika HäkkinenHKK | McLaren | 53 | 1:31:18.785 | 10 | |
| 2 | 1 | Michael SchumacherMSC | Ferrari | 53 | +5.015 | 6 | |
| 3 | 5 | Eddie IrvineIRV | Ferrari | 53 | +1:35.688 | 4 | |
| 4 | 4 | Heinz-Harald FrentzenFRE | Jordan | 53 | +1:38.635 | 3 | |
| 5 | 9 | Ralf SchumacherSCH | Williams | 53 | +1:39.494 | 2 | |
| 6 | 10 | Jean AlesiALE | Sauber | 52 | +1 Lap | 1 | |
| 7 | 8 | Johnny HerbertHER | Stewart | 52 | +1 Lap | 0 | |
| 8 | 13 | Rubens BarrichelloBAR | Stewart | 52 | +1 Lap | 0 | |
| 9 | 11 | Jacques VilleneuveVIL | BAR | 52 | +1 Lap | 0 | |
| 10 | 15 | Alexander WurzWUR | Benetton | 52 | +1 Lap | 0 | |
| 11 | 17 | Pedro DinizDIN | Sauber | 52 | +1 Lap | 0 | |
| 12 | 18 | Ricardo ZontaZON | BAR | 52 | +1 Lap | 0 | |
| 13 | 21 | Pedro de la RosaDLR | Arrows | 51 | +2 Laps | 0 | |
| 14 | 14 | Giancarlo FisichellaFIS | Benetton | 47 | Engine | 0 | |
| R | 19 | Toranosuke TakagiTAK | Arrows | 43 | Gearbox | 0 | |
| R | 22 | Luca BadoerBAD | Minardi | 43 | Engine | 0 | |
| R | 3 | David CoulthardCOU | McLaren | 39 | Hydraulics | 0 | |
| R | 20 | Marc GenéGEN | Minardi | 31 | Gearbox | 0 | |
| R | 12 | Damon HillHIL | Jordan | 21 | Physical | 0 | |
| R | 6 | Olivier PanisPAN | Prost | 19 | Alternator | 0 | |
| R | 7 | Jarno TrulliTRU | Prost | 3 | Engine | 0 | |
| R | 8 | Alessandro ZanardiZAN | Williams | 0 | Electrical | 0 |